Software Tools for Animal Gene Mapping
is a computer package for genomic prediction and variance component estimation for additive and dominance effects using SNP markers. Version 3.1 released 5/17/2013.
Windows. Mac . Linux.
is a software tool for the analysis of genome differences between populations. Version 1.3, 10/25/2012. Windows. Mac OS X.
is a graphic tool for SNP effect viewing and graphing of GWAS results. Version 3.2, 11/12/2012. Windows. Mac OS X.
is a parallel computing program for epistasis testing in genome-wide association studies for supercomputers and commodity clusters. Version 4.2, 9/16/2011.
is a computer package of serial computing programs for genome-wide testing of SNP epistasis and single-locus effects of complex or quantitative traits. Version 4.2, 9/16/2011. Updated 2/6/2012.
is a computer program for calculating statistical power and sample size for detecting QTL and candidate gene effects, including single-locus effects and pairwise epistasis effects. Version 1.0 is now available.
a computer package designed for rapid linkage analysis and map construction
of loci with a variety of inheritance modes. Version 1.1 is now available.
is a pedigree and genealogy visualization program designed to draw large, complex pedigrees with capability of calculating inbreeding and coancestry coefficients. Version 2.4 is now available.
a program for calculating and minimizing inbreeding coefficients. Version 2.0 is now available.