Software Tools for Animal Gene Mapping

is a graphic tool for SNP effect viewing and graphing.
(Version 2.1, 6/14/2011)

is a parallel computing program for epistasis testing in genome-wide association studies for supercomputers and commodity clusters. (Version 4.2, 9/16/2011)

is a computer package of serial computing programs for genome-wide testing of SNP epistasis and single-locus effects of complex or quantitative traits. (Version 4.2, 9/16/2011. Updated 2/6/2012)

is a computer program for calculating statistical power and sample size for detecting QTL and candidate gene effects, including single-locus effects and pairwise epistasis effects. Version 1.0 is now available.

is a computer package designed for rapid linkage analysis and map construction of loci with a variety of inheritance modes. Version 1.1 is now available.

is a pedigree and genealogy visualization program designed to draw large, complex pedigrees with capability of calculating inbreeding and coancestry coefficients. Version 2.4 is now available.

is a program for calculating and minimizing inbreeding coefficients. Version 2.0 is now available.